ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: H2A histone family, member Y
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000113648 H2AFY 9606 - 5:135333900-135399914 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304332 H2AFY-004 135334383-135399887 protein_coding
  ENST00000312469 H2AFY-002 135334410-135399211 protein_coding
  ENST00000360597 H2AFY-008 135334417-135399222 processed_transcript
  ENST00000423969 H2AFY-003 135334856-135399229 protein_coding
  ENST00000451949 H2AFY-010 135334381-135351544 processed_transcript
  ENST00000504197 H2AFY-007 135360416-135370146 retained_intron
  ENST00000505827 H2AFY-023 135335101-135345987 retained_intron
  ENST00000506218 H2AFY-014 135369481-135399214 retained_intron
  ENST00000506532 H2AFY-019 135369368-135399914 processed_transcript
  ENST00000506671 H2AFY-006 135334473-135399238 nonsense_mediated_decay
  ENST00000507868 H2AFY-017 135350814-135399204 retained_intron
  ENST00000508120 H2AFY-021 135360519-135399206 processed_transcript
  ENST00000508785 H2AFY-015 135359397-135399177 processed_transcript
  ENST00000508962 H2AFY-012 135388917-135399887 processed_transcript
  ENST00000510038 H2AFY-005 135334913-135399884 protein_coding
  ENST00000511494 H2AFY-011 135334435-135347606 retained_intron
  ENST00000511689 H2AFY-001 135333900-135399622 protein_coding
  ENST00000512507 H2AFY-009 135334381-135362901 processed_transcript
  ENST00000513210 H2AFY-016 135359722-135389059 processed_transcript
  ENST00000513268 H2AFY-018 135345690-135350955 retained_intron

Homo sapiens Ensembl GRCh38

Genome
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Sequences
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Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000304332ENST00000312469ENST00000360597ENST00000423969ENST00000451949ENST00000507868ENST00000510038ENST00000511689ENST00000512507
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000304332 16.918±5.85 27.866±7.72 9.962±0.00 15.805±0.00 14.020±3.62
ENST00000312469 16.159±10.31 35.087±11.28 11.639±0.00 27.802±0.00 24.976±5.34
ENST00000360597 N/A N/A N/A N/A 18.062±0.00
ENST00000423969 N/A 32.760±0.00 N/A N/A 28.746±5.31
ENST00000451949 6.548±0.00 N/A 17.290±0.00 N/A 16.006±1.01
ENST00000507868 N/A N/A N/A N/A 38.300±2.34
ENST00000510038 N/A N/A N/A N/A 14.815±0.00
ENST00000511689 2.693±0.00 4.721±0.00 N/A N/A 6.562±0.94
ENST00000512507 N/A 2.519±0.45 N/A N/A 1.971±0.57

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00083J CIL_00083J_0001 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0000182 IDA rDNA binding
GO:0000786 NAS:IEA nucleosome
GO:0000790 IDA nuclear chromatin
GO:0000793 IEA condensed chromosome
GO:0001739 TAS sex chromatin
GO:0001740 IDA Barr body
GO:0003677 NAS:IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0005721 IDA pericentric heterochromatin
GO:0005730 IDA nucleolus
GO:0006334 NAS:IEA nucleosome assembly
GO:0007549 IDA dosage compensation
GO:0010385 IDA double-stranded methylated DNA binding
GO:0016568 IEA chromatin modification
GO:0019901 IPI protein kinase binding
GO:0030291 IMP protein serine/threonine kinase inhibitor activity
GO:0031490 IDA chromatin DNA binding
GO:0033128 IMP negative regulation of histone phosphorylation
GO:0035098 IDA ESC/E(Z) complex
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045814 IMP negative regulation of gene expression, epigenetic
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome
GO:0071169 IMP establishment of protein localization to chromatin
GO:0071901 IMP negative regulation of protein serine/threonine kinase activity
GO:1901837 IGI negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter
GO:1902750 IMP negative regulation of cell cycle G2/M phase transition

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000015937 H2afy protein_coding Mus_musculus

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