ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015937 H2afy 10090 - 13:56073619-56136361 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000016081 H2afy-001 56073619-56135631 protein_coding
  ENSMUST00000045788 H2afy-002 56073619-56135631 protein_coding
  ENSMUST00000137835 H2afy-008 56074166-56084521 retained_intron
  ENSMUST00000139511 H2afy-003 56095556-56135530 processed_transcript
  ENSMUST00000141031 H2afy-004 56100889-56135440 retained_intron
  ENSMUST00000141589 H2afy-007 56074359-56090058 retained_intron
  ENSMUST00000154564 H2afy-006 56104441-56134825 processed_transcript
  ENSMUST00000154778 H2afy-005 56104430-56136361 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000016081ENSMUST00000045788ENSMUST00000139511
Transcript ID C166 Tie2+ EC mES
ENSMUST00000016081 36.575±6.68 11.775±3.66 22.370±10.83
ENSMUST00000045788 6.178±0.27 14.344±4.52 N/A
ENSMUST00000139511 21.253±3.47 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0009AP CIL_0009AP_0002 VISTA
CIL_00083J CIL_00083J_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000182 IEA rDNA binding
GO:0000790 IEA nuclear chromatin
GO:0000793 IDA condensed chromosome
GO:0001740 ISO Barr body
GO:0003682 IDA chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005721 IEA pericentric heterochromatin
GO:0005730 IEA nucleolus
GO:0005813 TAS centrosome
GO:0006334 IEA nucleosome assembly
GO:0007549 ISO dosage compensation
GO:0010385 IEA double-stranded methylated DNA binding
GO:0016568 IEA chromatin modification
GO:0019901 IEA protein kinase binding
GO:0030291 IEA protein serine/threonine kinase inhibitor activity
GO:0031490 IEA chromatin DNA binding
GO:0033128 IEA negative regulation of histone phosphorylation
GO:0035098 IEA ESC/E(Z) complex
GO:0044212 IEA transcription regulatory region DNA binding
GO:0045814 IEA negative regulation of gene expression, epigenetic
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IEA extracellular vesicular exosome
GO:0071169 IEA establishment of protein localization to chromatin
GO:0071901 IEA negative regulation of protein serine/threonine kinase activity
GO:1901837 IMP negative regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter
GO:1902750 IEA negative regulation of cell cycle G2/M phase transition

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000113648 H2AFY H2A histone family, member Y protein_coding Homo_sapiens

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