ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: ring finger protein 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000114125 RNF7 9606 + 3:141738204-141747560 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000273480 RNF7-001 141738204-141747560 protein_coding
  ENST00000393000 RNF7-002 141738297-141745702 protein_coding
  ENST00000477012 RNF7-003 141738304-141745669 nonsense_mediated_decay
  ENST00000477393 RNF7-004 141738319-141745517 nonsense_mediated_decay
  ENST00000480908 RNF7-007 141738277-141745700 protein_coding
  ENST00000486377 RNF7-005 141745842-141746394 processed_transcript
  ENST00000498828 RNF7-006 141738249-141743027 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000273480ENST00000393000ENST00000480908
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000273480 5.796±1.83 2.527±0.66 1.939±0.00 3.410±0.00 8.868±6.48
ENST00000393000 115.902±10.17 48.977±24.75 37.911±0.00 55.951±0.00 50.093±29.86
ENST00000480908 38.293±0.00 13.372±4.67 9.103±0.00 16.982±0.00 32.775±22.44

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008I1 CIL_0008I1_0001 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005507 TAS copper ion binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0008631 TAS intrinsic apoptotic signaling pathway in response to oxidative stress
GO:0016567 IEA protein ubiquitination
GO:0019788 IDA NEDD8 ligase activity
GO:0031466 IDA Cul5-RING ubiquitin ligase complex
GO:0043066 TAS negative regulation of apoptotic process
GO:0045116 IDA protein neddylation
GO:0051775 TAS response to redox state

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055524 rnf7 protein_coding Danio_rerio
ENSMUSG00000048185 Gm7075 protein_coding Mus_musculus
ENSMUSG00000051234 Rnf7 protein_coding Mus_musculus

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