ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: ring finger protein 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000273480 RNF7-001 ENSG00000114125 9606 + 3:141738204-141747560 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000273480
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000273480 5.796±1.83 2.527±0.66 1.939±0.00 3.410±0.00 8.868±6.48

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005507 TAS copper ion binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0008631 TAS intrinsic apoptotic signaling pathway in response to oxidative stress
GO:0016567 IEA protein ubiquitination
GO:0019788 IDA NEDD8 ligase activity
GO:0031466 IDA Cul5-RING ubiquitin ligase complex
GO:0043066 TAS negative regulation of apoptotic process
GO:0045116 IDA protein neddylation
GO:0051775 TAS response to redox state

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057500 Rnf7-001 protein_coding Mus_musculus 0 542
ENSMUST00000054760 Gm7075-201 protein_coding Mus_musculus 0 484
ENSMUST00000121986 Gm12362-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000071301 Rnf7-002 protein_coding Mus_musculus 0 438
ENSMUST00000151704 Gm6152-001 processed_pseudogene Mus_musculus 0 399
ENSMUST00000192115 Gm7445-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000128955 Rnf7-003 processed_transcript Mus_musculus 0 329
ENSDART00000077895 rnf7-001 protein_coding Danio_rerio 0 283
ENSMUST00000077549 Prss43-001 protein_coding Mus_musculus 0.000000000000005 88

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