ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: autophagy related 4C, cysteine peptidase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000125703 ATG4C 9606 + 1:62784135-62865513 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317868 ATG4C-001 62784135-62865513 protein_coding
  ENST00000371118 ATG4C-004 62785233-62819179 protein_coding
  ENST00000371120 ATG4C-002 62784135-62865513 protein_coding
  ENST00000414558 ATG4C-005 62821183-62835529 protein_coding
  ENST00000443289 ATG4C-003 62784135-62819065 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000317868ENST00000371118ENST00000371120ENST00000414558ENST00000443289
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000317868 0.547±0.00 1.918±0.87 0.840±0.00 1.042±0.82
ENST00000371118 N/A 2.558±0.00 N/A 2.535±1.20
ENST00000371120 1.000±0.00 0.991±0.43 N/A 1.296±0.84
ENST00000414558 N/A 5.793±0.00 N/A N/A
ENST00000443289 N/A N/A N/A 1.460±0.07

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002G5 CIL_0002G5_0001 CGP
CIL_0008H9 CIL_0008H9_0001 VISTA
CIL_00085L CIL_00085L_0001 VISTA
CIL_00089A CIL_00089A_0001 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000045 IGI autophagic vacuole assembly
GO:0004197 IMP cysteine-type endopeptidase activity
GO:0005576 IDA extracellular region
GO:0005737 IEA:ISS cytoplasm
GO:0005829 ISS cytosol
GO:0006508 IEA:IDA proteolysis
GO:0006612 ISS protein targeting to membrane
GO:0006914 IEA:IGI autophagy
GO:0008233 IDA peptidase activity
GO:0008234 IEA cysteine-type peptidase activity
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044373 atg4c protein_coding Danio_rerio
ENSMUSG00000028550 Atg4c protein_coding Mus_musculus

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