ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028550 Atg4c 10090 + 4:99193934-99259787 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030279 Atg4c-001 99193934-99259787 protein_coding
  ENSMUST00000152121 Atg4c-002 99218091-99221695 processed_transcript
  ENSMUST00000180278 Atg4c-201 99194147-99259783 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000030279ENSMUST00000180278
Transcript ID C166 Tie2+ EC mES
ENSMUST00000030279 0.999±0.26 0.687±0.00 1.510±0.00
ENSMUST00000180278 1.675±0.33 1.332±0.80 1.133±0.05

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008H9 CIL_0008H9_0002 VISTA
CIL_0002G5 CIL_0002G5_0002 CGP
CIL_00085L CIL_00085L_0002 VISTA
CIL_00089A CIL_00089A_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000045 IEA autophagic vacuole assembly
GO:0004197 ISS cysteine-type endopeptidase activity
GO:0005576 IEA extracellular region
GO:0005737 ISS cytoplasm
GO:0006508 IEA proteolysis
GO:0006914 ISS autophagy
GO:0008233 IEA peptidase activity
GO:0008234 ISA cysteine-type peptidase activity
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044373 atg4c protein_coding Danio_rerio
ENSG00000125703 ATG4C autophagy related 4C, cysteine peptidase protein_coding Homo_sapiens

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