ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000128534 LSM8 9606 + 7:118184032-118192824 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000249299 LSM8-001 118184032-118192824 protein_coding
  ENST00000411938 LSM8-004 118184167-118188405 protein_coding
  ENST00000422760 LSM8-003 118184156-118192164 protein_coding
  ENST00000424702 LSM8-002 118184144-118192155 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000249299ENST00000411938ENST00000422760ENST00000424702
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000249299 20.068±0.12 7.622±1.60 13.618±0.00 12.727±0.00 14.698±7.69
ENST00000411938 64.902±16.46 44.648±6.87 78.682±0.00 67.987±0.00 157.847±40.68
ENST00000422760 N/A 1.234±0.33 4.910±0.00 2.741±0.00 2.801±2.12
ENST00000424702 N/A 0.869±0.00 1.370±0.00 0.874±0.00 1.156±0.57

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003QX CIL_0003QX_0001 CGP
CIL_0003QY CIL_0003QY_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005681 IEA spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0017070 NAS U6 snRNA binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091656 lsm8 protein_coding Danio_rerio
ENSMUSG00000044155 Lsm8 protein_coding Mus_musculus

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