ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000044155 Lsm8 10090 + 6:18848579-18855751 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000056398 Lsm8-001 18848579-18854053 protein_coding
  ENSMUST00000128526 Lsm8-003 18848656-18850407 retained_intron
  ENSMUST00000136982 Lsm8-002 18848641-18855751 retained_intron
  ENSMUST00000201141 Lsm8-004 18848668-18853747 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000056398ENSMUST00000136982
Transcript ID C166 Tie2+ EC mES
ENSMUST00000056398 78.166±12.94 32.240±14.71 18.501±0.85
ENSMUST00000136982 N/A N/A 0.375±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003QX CIL_0003QX_0002 CGP
CIL_0003QY CIL_0003QY_0002 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005681 IEA spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0008150 ND biological_process
GO:0008380 IEA RNA splicing
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091656 lsm8 protein_coding Danio_rerio
ENSG00000128534 LSM8 LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae) protein_coding Homo_sapiens

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