ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: PHD finger protein 20-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000129292 PHF20L1 9606 + 8:132775358-132848807 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000220847 PHF20L1-201 132775358-132845923 protein_coding
  ENST00000315808 PHF20L1-001 132775400-132825341 retained_intron
  ENST00000337920 PHF20L1-002 132775408-132812316 protein_coding
  ENST00000361997 PHF20L1-009 132775375-132818970 retained_intron
  ENST00000395374 PHF20L1-004 132803541-132813188 retained_intron
  ENST00000395376 PHF20L1-010 132775580-132812316 protein_coding
  ENST00000395379 PHF20L1-003 132775375-132811888 protein_coding
  ENST00000395383 PHF20L1-011 132775372-132825334 retained_intron
  ENST00000395386 PHF20L1-008 132775384-132848807 protein_coding
  ENST00000395390 PHF20L1-015 132777792-132848807 protein_coding
  ENST00000460236 PHF20L1-014 132817408-132847580 nonsense_mediated_decay
  ENST00000469979 PHF20L1-007 132806381-132825371 retained_intron
  ENST00000477051 PHF20L1-013 132841553-132847587 retained_intron
  ENST00000485595 PHF20L1-005 132775398-132799929 retained_intron
  ENST00000486199 PHF20L1-006 132777823-132825337 nonsense_mediated_decay
  ENST00000493126 PHF20L1-012 132836345-132837816 retained_intron
  ENST00000521038 PHF20L1-017 132799159-132811084 nonsense_mediated_decay
  ENST00000522253 PHF20L1-018 132816784-132824057 retained_intron
  ENST00000522580 PHF20L1-016 132777789-132798816 protein_coding
  ENST00000622263 PHF20L1-202 132775358-132845923 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000220847ENST00000395386ENST00000395390ENST00000460236ENST00000469979ENST00000522253ENST00000622263
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000220847 N/A 3.574±1.48 N/A 7.750±0.00 3.835±1.57
ENST00000395386 0.374±0.00 4.737±1.00 N/A N/A 2.552±0.99
ENST00000395390 0.676±0.00 3.626±2.00 2.097±0.00 7.602±0.00 3.657±1.59
ENST00000460236 N/A 3.193±1.67 3.949±0.00 N/A 3.680±1.09
ENST00000469979 N/A 5.065±0.84 N/A N/A 2.353±0.13
ENST00000522253 N/A N/A N/A N/A 25.822±0.00
ENST00000622263 N/A 2.107±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0004PX CIL_0004PX_0001 CGP
CIL_0004PY CIL_0004PY_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017427 phf20l1 protein_coding Danio_rerio
ENSMUSG00000072501 Phf20l1 protein_coding Mus_musculus

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