ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: lin-28 homolog A (C. elegans)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000131914 LIN28A 9606 + 1:26410778-26429722 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000254231 LIN28A-201 26410817-26429719 protein_coding
  ENST00000326279 LIN28A-001 26410778-26429722 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000254231ENST00000326279
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000254231 N/A 0.033±0.02 0.025±0.00 N/A 0.040±0.03
ENST00000326279 0.049±0.00 0.041±0.02 0.056±0.00 0.105±0.00 0.069±0.06

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000932 IDA cytoplasmic mRNA processing body
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003723 IDA RNA binding
GO:0003729 IEA mRNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IDA cytoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007281 IEA germ cell development
GO:0008270 IEA zinc ion binding
GO:0010494 IDA cytoplasmic stress granule
GO:0010586 IEA miRNA metabolic process
GO:0010587 IMP miRNA catabolic process
GO:0019827 IMP stem cell maintenance
GO:0031054 IMP pre-miRNA processing
GO:0031123 IMP RNA 3'-end processing
GO:0031369 IEA translation initiation factor binding
GO:0035198 IEA miRNA binding
GO:0045666 IEA positive regulation of neuron differentiation
GO:0045686 IEA negative regulation of glial cell differentiation
GO:0045727 IEA positive regulation of translation
GO:0048863 IEA stem cell differentiation
GO:0060964 IEA regulation of gene silencing by miRNA
GO:1901724 IEA positive regulation of cell proliferation involved in kidney development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004328 si:ch1073-284b18.2 protein_coding Danio_rerio
ENSDARG00000016999 lin28a TR_J_gene Danio_rerio
ENSMUSG00000050966 Lin28a protein_coding Mus_musculus

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