ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: makorin ring finger protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000133606 MKRN1 9606 - 7:140453040-140479569 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000255977 MKRN1-001 140453040-140479569 protein_coding
  ENST00000443720 MKRN1-002 140456192-140479499 protein_coding
  ENST00000463142 MKRN1-018 140454464-140455911 protein_coding
  ENST00000467513 MKRN1-013 140459091-140478656 protein_coding
  ENST00000468447 MKRN1-017 140454665-140456919 retained_intron
  ENST00000471104 MKRN1-011 140459007-140479066 protein_coding
  ENST00000473444 MKRN1-012 140459798-140479037 protein_coding
  ENST00000474576 MKRN1-007 140454268-140478984 protein_coding
  ENST00000475010 MKRN1-006 140453047-140479336 retained_intron
  ENST00000475180 MKRN1-016 140459841-140479182 nonsense_mediated_decay
  ENST00000480552 MKRN1-015 140456180-140478926 protein_coding
  ENST00000481705 MKRN1-009 140459929-140479536 processed_transcript
  ENST00000494939 MKRN1-014 140459178-140478503 protein_coding
  ENST00000495305 MKRN1-003 140454143-140479368 nonsense_mediated_decay
  ENST00000496169 MKRN1-005 140456186-140479355 nonsense_mediated_decay
  ENST00000498535 MKRN1-010 140459772-140479354 nonsense_mediated_decay

Homo sapiens Ensembl GRCh38

Genome
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Sequences
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Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000255977ENST00000443720ENST00000474576ENST00000475010
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000255977 N/A 6.240±1.56 8.265±0.00 8.990±4.61
ENST00000443720 4.132±0.00 6.942±1.96 11.046±0.00 5.327±2.75
ENST00000474576 N/A 8.251±1.13 N/A 4.472±1.74
ENST00000475010 N/A N/A N/A 1.928±0.39

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008ZU CIL_0008ZU_0001 VISTA
CIL_000305 CIL_000305_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000209 IDA protein polyubiquitination
GO:0003682 IEA chromatin binding
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005575 ND cellular_component
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041665 mkrn1 protein_coding Danio_rerio
ENSMUSG00000029922 Mkrn1 protein_coding Mus_musculus

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