ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029922 Mkrn1 10090 - 6:39397804-39420462 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031985 Mkrn1-001 39397804-39420462 protein_coding
  ENSMUST00000051671 Mkrn1-005 39400760-39420358 protein_coding
  ENSMUST00000114822 Mkrn1-002 39405539-39420298 protein_coding
  ENSMUST00000114823 Mkrn1-004 39397804-39419776 protein_coding
  ENSMUST00000122874 Mkrn1-008 39401275-39405081 retained_intron
  ENSMUST00000122996 Mkrn1-003 39400754-39420067 protein_coding
  ENSMUST00000146785 Mkrn1-006 39404811-39419757 protein_coding
  ENSMUST00000150575 Mkrn1-007 39399143-39404730 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000031985ENSMUST00000051671ENSMUST00000114822
Transcript ID C166 Tie2+ EC mES
ENSMUST00000031985 21.365±1.84 11.428±0.53 1.988±0.14
ENSMUST00000051671 N/A 3.882±0.00 1.836±0.20
ENSMUST00000114822 N/A 13.812±6.92 4.699±0.90

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008ZU CIL_0008ZU_0002 VISTA
CIL_000305 CIL_000305_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000209 IEA protein polyubiquitination
GO:0003682 IDA chromatin binding
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041665 mkrn1 protein_coding Danio_rerio
ENSG00000133606 MKRN1 makorin ring finger protein 1 protein_coding Homo_sapiens

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