ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: TRAF-type zinc finger domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000135148 TRAFD1 9606 + 12:112125501-112153609 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000257604 TRAFD1-201 112125545-112153603 protein_coding
  ENST00000412615 TRAFD1-001 112125501-112153609 protein_coding
  ENST00000547063 TRAFD1-007 112125554-112142148 nonsense_mediated_decay
  ENST00000548092 TRAFD1-006 112125557-112140910 protein_coding
  ENST00000548277 TRAFD1-008 112141953-112148213 retained_intron
  ENST00000549358 TRAFD1-005 112125545-112140986 protein_coding
  ENST00000550051 TRAFD1-002 112125538-112141491 retained_intron
  ENST00000552890 TRAFD1-003 112125560-112149808 nonsense_mediated_decay
  ENST00000552896 TRAFD1-004 112125563-112142295 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000257604ENST00000412615ENST00000550051ENST00000552890
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000257604 N/A 0.690±0.19 N/A N/A 1.259±0.65
ENST00000412615 1.751±0.00 19.841±13.56 1.668±0.00 11.574±0.00 8.774±5.12
ENST00000550051 N/A 2.458±0.62 N/A N/A 0.344±0.05
ENST00000552890 N/A N/A N/A 5.317±0.00 0.705±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0034097 IEA response to cytokine
GO:0045824 ISS negative regulation of innate immune response
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075123 trafd1 protein_coding Danio_rerio
ENSMUSG00000042726 Trafd1 protein_coding Mus_musculus

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