ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136521 NDUFB5 9606 + 3:179604690-179627647 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000259037 NDUFB5-001 179604702-179624497 protein_coding
  ENST00000359944 NDUFB5-003 179604811-179624500 nonsense_mediated_decay
  ENST00000468210 NDUFB5-006 179604809-179624376 nonsense_mediated_decay
  ENST00000471112 NDUFB5-016 179616007-179624498 protein_coding
  ENST00000472629 NDUFB5-005 179604801-179624235 protein_coding
  ENST00000473500 NDUFB5-012 179604907-179624351 processed_transcript
  ENST00000476587 NDUFB5-011 179616975-179624377 retained_intron
  ENST00000477177 NDUFB5-007 179604816-179615408 retained_intron
  ENST00000480374 NDUFB5-009 179604841-179624267 nonsense_mediated_decay
  ENST00000482604 NDUFB5-008 179604826-179624091 protein_coding
  ENST00000488002 NDUFB5-004 179604690-179617418 retained_intron
  ENST00000491054 NDUFB5-010 179615206-179618522 retained_intron
  ENST00000493716 NDUFB5-014 179618227-179624100 retained_intron
  ENST00000493866 NDUFB5-002 179604791-179627647 protein_coding
  ENST00000496904 NDUFB5-013 179604890-179618477 processed_transcript
  ENST00000611971 NDUFB5-201 179604787-179624499 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000259037ENST00000359944ENST00000471112ENST00000476587ENST00000482604ENST00000488002ENST00000491054ENST00000493866ENST00000611971
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000259037 N/A 24.690±0.96 N/A N/A 24.907±14.50
ENST00000359944 16.393±0.00 22.438±14.49 N/A 14.734±0.00 9.259±3.19
ENST00000471112 N/A N/A 24.739±0.00 N/A N/A
ENST00000476587 33.045±10.62 20.675±3.25 18.307±0.00 29.328±0.00 24.401±8.16
ENST00000482604 N/A 19.408±2.44 N/A 14.440±0.00 18.620±3.30
ENST00000488002 N/A N/A N/A N/A 2.684±0.00
ENST00000491054 N/A N/A N/A N/A 3.072±1.95
ENST00000493866 N/A N/A 1.260±0.00 N/A 0.368±0.23
ENST00000611971 39.658±0.00 23.014±7.88 N/A 20.302±0.00 24.067±18.20

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00049U CIL_00049U_0002 CGP
CIL_00049V CIL_00049V_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0005747 IDA mitochondrial respiratory chain complex I
GO:0006120 NAS mitochondrial electron transport, NADH to ubiquinone
GO:0008137 NAS NADH dehydrogenase (ubiquinone) activity
GO:0016021 IEA integral component of membrane
GO:0022904 TAS respiratory electron transport chain
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070824 ndufb5 protein_coding Danio_rerio
ENSMUSG00000027673 Ndufb5 protein_coding Mus_musculus

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