ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: protein tyrosine phosphatase, receptor type, F
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000142949 PTPRF 9606 + 1:43525187-43623666 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359947 PTPRF-001 43530876-43623666 protein_coding
  ENST00000372405 PTPRF-004 43538198-43580078 processed_transcript
  ENST00000372407 PTPRF-005 43598839-43623663 protein_coding
  ENST00000412568 PTPRF-014 43591021-43622283 protein_coding
  ENST00000414879 PTPRF-006 43591450-43622842 protein_coding
  ENST00000429895 PTPRF-015 43591053-43623654 protein_coding
  ENST00000436724 PTPRF-003 43530903-43580078 processed_transcript
  ENST00000437607 PTPRF-013 43545076-43579284 protein_coding
  ENST00000438120 PTPRF-002 43530890-43622357 protein_coding
  ENST00000463041 PTPRF-012 43605582-43606868 processed_transcript
  ENST00000467464 PTPRF-011 43582480-43591118 processed_transcript
  ENST00000477970 PTPRF-007 43613140-43622863 processed_transcript
  ENST00000481019 PTPRF-010 43528562-43553539 processed_transcript
  ENST00000496043 PTPRF-009 43525187-43553519 processed_transcript
  ENST00000496447 PTPRF-008 43598074-43623666 processed_transcript
  ENST00000617451 PTPRF-201 43530876-43579285 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHUVECENST00000359947ENST00000372407ENST00000414879ENST00000429895ENST00000438120ENST00000477970ENST00000496447
Transcript ID BECs HAoEC HHSEC HUVEC
ENST00000359947 N/A 8.652±1.94 N/A 23.454±13.12
ENST00000372407 9.712±0.00 22.154±6.72 1.223±0.00 24.159±10.47
ENST00000414879 N/A 13.394±3.27 N/A N/A
ENST00000429895 N/A 16.546±0.00 N/A 18.596±7.67
ENST00000438120 N/A 13.623±3.85 N/A 30.598±18.28
ENST00000477970 N/A N/A N/A 6.695±0.00
ENST00000496447 N/A N/A N/A 10.448±7.30

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0005B6 CIL_0005B6_0002 CGP
CIL_0005B7 CIL_0005B7_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 IDA:IEA protein tyrosine phosphatase activity
GO:0005001 TAS transmembrane receptor protein tyrosine phosphatase activity
GO:0005515 IEA protein binding
GO:0005887 TAS integral component of plasma membrane
GO:0006470 IEA protein dephosphorylation
GO:0007155 IEA cell adhesion
GO:0007185 TAS transmembrane receptor protein tyrosine phosphatase signaling pathway
GO:0008201 IEA heparin binding
GO:0016311 IEA dephosphorylation
GO:0016477 IMP cell migration
GO:0016791 IEA phosphatase activity
GO:0032403 IEA protein complex binding
GO:0035335 IMP peptidyl-tyrosine dephosphorylation
GO:0070062 IDA extracellular vesicular exosome
GO:1900121 IMP negative regulation of receptor binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005754 ptprfb protein_coding Danio_rerio
ENSMUSG00000033295 Ptprf protein_coding Mus_musculus

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