ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000143434 SEMA6C 9606 - 1:151131685-151146664 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000341697 SEMA6C-004 151131707-151146611 protein_coding
  ENST00000368912 SEMA6C-003 151131685-151146457 protein_coding
  ENST00000368913 SEMA6C-002 151131685-151146457 protein_coding
  ENST00000368914 SEMA6C-001 151131685-151146628 protein_coding
  ENST00000464018 SEMA6C-006 151134199-151135266 processed_transcript
  ENST00000479820 SEMA6C-005 151132067-151132868 processed_transcript
  ENST00000485745 SEMA6C-008 151137712-151139461 processed_transcript
  ENST00000489944 SEMA6C-007 151134331-151134875 processed_transcript
  ENST00000613223 SEMA6C-201 151132197-151146664 protein_coding
  ENST00000621728 SEMA6C-202 151131969-151144406 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000341697ENST00000368912ENST00000368914ENST00000479820ENST00000613223
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000341697 N/A 1.565±0.30 1.179±0.00 1.031±0.00 3.769±2.90
ENST00000368912 9.875±0.11 N/A 2.748±0.00 N/A 0.015±0.00
ENST00000368914 12.389±2.30 7.134±4.04 7.393±0.00 0.969±0.00 16.868±11.64
ENST00000479820 60.952±5.03 N/A 27.372±0.00 N/A 12.021±0.00
ENST00000613223 N/A 3.277±2.12 N/A N/A 3.167±1.36

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007275 IEA multicellular organismal development
GO:0007411 IEA axon guidance
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030215 IEA semaphorin receptor binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000189 sema6e protein_coding Danio_rerio
ENSDARG00000002748 sema6d protein_coding Danio_rerio
ENSMUSG00000038777 Sema6c protein_coding Mus_musculus

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