ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: ubiquitin specific peptidase 53
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000145390 USP53 9606 + 4:119212587-119295517 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000274030 USP53-001 119212636-119294746 protein_coding
  ENST00000450251 USP53-201 119239216-119295517 protein_coding
  ENST00000507597 USP53-007 119212741-119239341 processed_transcript
  ENST00000507906 USP53-008 119261793-119271353 nonsense_mediated_decay
  ENST00000509769 USP53-003 119239640-119294638 nonsense_mediated_decay
  ENST00000510737 USP53-006 119213179-119239312 processed_transcript
  ENST00000510852 USP53-004 119267381-119273330 retained_intron
  ENST00000514305 USP53-005 119212743-119220211 processed_transcript
  ENST00000514665 USP53-002 119212587-119221495 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000274030ENST00000450251ENST00000507597ENST00000509769ENST00000514305ENST00000514665
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000274030 N/A 1.849±2.60 N/A 0.674±0.00 1.908±1.02
ENST00000450251 1.078±0.13 2.932±4.91 0.250±0.00 1.387±0.00 3.337±2.02
ENST00000507597 N/A N/A N/A N/A 8.082±0.00
ENST00000509769 N/A 2.612±1.87 N/A 2.670±0.00 3.201±2.04
ENST00000514305 N/A N/A 4.161±0.00 N/A N/A
ENST00000514665 N/A N/A N/A N/A 2.471±1.12

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008150 ND biological_process
GO:0036459 IEA ubiquitinyl hydrolase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076499 usp53b protein_coding Danio_rerio
ENSDARG00000078615 USP53 protein_coding Danio_rerio
ENSMUSG00000039701 Usp53 protein_coding Mus_musculus

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