ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: cadherin 18, type 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000145526 CDH18 9606 - 5:19472951-20575873 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000274170 CDH18-201 19473048-19839244 protein_coding
  ENST00000382275 CDH18-001 19473032-19988230 protein_coding
  ENST00000502796 CDH18-003 19473579-19988185 protein_coding
  ENST00000503132 CDH18-009 19839139-19988199 processed_transcript
  ENST00000506372 CDH18-004 19473573-19886272 protein_coding
  ENST00000507632 CDH18-007 19839050-20575863 processed_transcript
  ENST00000507958 CDH18-005 19473048-20575873 protein_coding
  ENST00000508350 CDH18-010 19721391-19804028 processed_transcript
  ENST00000510297 CDH18-011 19472951-19478636 processed_transcript
  ENST00000511273 CDH18-002 19502682-19988207 protein_coding
  ENST00000511423 CDH18-008 19838972-19988198 processed_transcript
  ENST00000515257 CDH18-006 19473615-19838824 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000274170ENST00000507958ENST00000508350ENST00000510297ENST00000511273ENST00000515257
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000274170 N/A N/A N/A N/A 0.024±0.01
ENST00000507958 N/A 0.012±0.00 0.026±0.00 0.034±0.00 0.022±0.02
ENST00000508350 1.131±1.02 0.108±0.04 0.660±0.00 N/A 0.224±0.15
ENST00000510297 N/A N/A N/A N/A 0.042±0.01
ENST00000511273 N/A 0.011±0.00 N/A N/A 0.014±0.00
ENST00000515257 N/A N/A N/A N/A 0.035±0.01

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 TAS plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0034329 TAS cell junction assembly
GO:0034332 TAS adherens junction organization
GO:0045216 TAS cell-cell junction organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061371 cdh18a protein_coding Danio_rerio
ENSMUSG00000040420 Cdh18 protein_coding Mus_musculus

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