ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: single-stranded DNA binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000145687 SSBP2 9606 - 5:81413021-81751797 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000320672 SSBP2-001 81413021-81751253 protein_coding
  ENST00000504136 SSBP2-015 81420435-81443273 retained_intron
  ENST00000504174 SSBP2-010 81467017-81750901 processed_transcript
  ENST00000504985 SSBP2-008 81419936-81513717 protein_coding
  ENST00000505980 SSBP2-007 81420014-81751047 protein_coding
  ENST00000506960 SSBP2-014 81615056-81751028 retained_intron
  ENST00000507472 SSBP2-017 81466973-81751120 processed_transcript
  ENST00000507655 SSBP2-012 81446869-81751797 processed_transcript
  ENST00000507968 SSBP2-018 81615486-81616585 processed_transcript
  ENST00000508912 SSBP2-016 81636472-81751016 retained_intron
  ENST00000509013 SSBP2-013 81466974-81751022 protein_coding
  ENST00000509053 SSBP2-006 81419873-81751048 protein_coding
  ENST00000509743 SSBP2-019 81442651-81616473 processed_transcript
  ENST00000510060 SSBP2-021 81419979-81448063 processed_transcript
  ENST00000512098 SSBP2-011 81473700-81750757 processed_transcript
  ENST00000512923 SSBP2-009 81419963-81513717 protein_coding
  ENST00000513785 SSBP2-020 81420288-81437830 retained_intron
  ENST00000514493 SSBP2-003 81419918-81751250 protein_coding
  ENST00000515395 SSBP2-004 81420181-81751097 protein_coding
  ENST00000615665 SSBP2-201 81417360-81751253 protein_coding
  ENST00000622130 SSBP2-202 81419935-81751086 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000320672ENST00000504985ENST00000505980ENST00000507472ENST00000507968ENST00000509013ENST00000509053ENST00000510060ENST00000512923ENST00000514493ENST00000515395ENST00000615665ENST00000622130
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000320672 0.100±0.02 0.413±0.35 0.888±0.00 0.236±0.00 0.300±0.16
ENST00000504985 N/A 1.249±0.00 N/A N/A N/A
ENST00000505980 N/A 6.207±0.00 N/A N/A 1.687±0.00
ENST00000507472 N/A 17.239±0.00 N/A N/A 4.200±0.59
ENST00000507968 N/A 3.885±0.37 N/A N/A 19.270±8.84
ENST00000509013 N/A N/A N/A N/A 3.373±1.57
ENST00000509053 0.313±0.00 N/A N/A 1.332±0.00 N/A
ENST00000510060 0.202±0.00 N/A 15.332±0.00 N/A N/A
ENST00000512923 0.479±0.00 N/A N/A 4.616±0.00 N/A
ENST00000514493 N/A 3.715±3.16 N/A N/A 2.007±1.07
ENST00000515395 N/A N/A N/A N/A 2.064±0.25
ENST00000615665 N/A 0.242±0.00 N/A N/A 0.387±0.00
ENST00000622130 0.493±0.00 8.180±5.89 2.251±0.00 1.570±0.00 4.179±1.90

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0005TJ CIL_0005TJ_0002 CGP
CIL_0005TK CIL_0005TK_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003697 NAS single-stranded DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006355 NAS regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057395 SSBP2 (1 of 2) protein_coding Danio_rerio
ENSMUSG00000003992 Ssbp2 protein_coding Mus_musculus

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