ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000003992 Ssbp2 10090 + 13:91460283-91703429 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000004094 Ssbp2-001 91461050-91703429 protein_coding
  ENSMUST00000042122 Ssbp2-004 91461091-91701236 protein_coding
  ENSMUST00000133984 Ssbp2-006 91539343-91657776 processed_transcript
  ENSMUST00000137493 Ssbp2-003 91461160-91672408 retained_intron
  ENSMUST00000137658 Ssbp2-009 91670437-91691432 retained_intron
  ENSMUST00000138488 Ssbp2-007 91461127-91539399 nonsense_mediated_decay
  ENSMUST00000141381 Ssbp2-005 91461181-91524866 retained_intron
  ENSMUST00000144659 Ssbp2-002 91461163-91565210 retained_intron
  ENSMUST00000156547 Ssbp2-008 91460283-91688866 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000004094ENSMUST00000042122ENSMUST00000133984ENSMUST00000156547
Transcript ID C166 Tie2+ EC mES
ENSMUST00000004094 N/A N/A 1.698±0.30
ENSMUST00000042122 27.937±3.42 2.921±0.87 21.835±4.50
ENSMUST00000133984 N/A 4.346±1.59 N/A
ENSMUST00000156547 15.098±1.47 2.214±0.18 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000922 CIL_000922_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003697 IEA single-stranded DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057395 SSBP2 (1 of 2) protein_coding Danio_rerio
ENSG00000145687 SSBP2 single-stranded DNA binding protein 2 protein_coding Homo_sapiens

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