ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: nuclear receptor subfamily 6, group A, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148200 NR6A1 9606 - 9:124517275-124771310 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000344523 NR6A1-004 124522467-124771287 protein_coding
  ENST00000373584 NR6A1-003 124522424-124771297 protein_coding
  ENST00000416460 NR6A1-002 124522426-124771310 protein_coding
  ENST00000475178 NR6A1-005 124538092-124595808 protein_coding
  ENST00000487099 NR6A1-001 124517275-124771277 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000344523ENST00000373584ENST00000416460ENST00000475178ENST00000487099
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000344523 N/A 0.295±0.24 N/A 0.134±0.06
ENST00000373584 N/A 0.031±0.00 N/A 0.065±0.02
ENST00000416460 N/A 0.071±0.03 N/A 0.120±0.00
ENST00000475178 N/A 0.078±0.00 N/A 0.101±0.00
ENST00000487099 0.055±0.00 0.182±0.29 0.020±0.00 0.063±0.02

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008N3 CIL_0008N3_0001 VISTA
CIL_00098L CIL_00098L_0001 VISTA
CIL_00075I CIL_00075I_0001 CGP
CIL_00075J CIL_00075J_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 ISS DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0004879 TAS ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005667 ISS transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0007276 ISS gamete generation
GO:0007283 TAS spermatogenesis
GO:0008270 IEA zinc ion binding
GO:0008283 TAS cell proliferation
GO:0010467 TAS gene expression
GO:0030522 TAS intracellular receptor signaling pathway
GO:0042803 ISS protein homodimerization activity
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 ISS:IEA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000063972 Nr6a1 protein_coding Mus_musculus

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