ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000063972 Nr6a1 10090 - 2:38723370-38927688 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000076275 Nr6a1-201 38723374-38926217 protein_coding
  ENSMUST00000112877 Nr6a1-001 38723370-38927688 protein_coding
  ENSMUST00000123099 Nr6a1-005 38781920-38784469 processed_transcript
  ENSMUST00000123342 Nr6a1-008 38737597-38740464 processed_transcript
  ENSMUST00000128688 Nr6a1-007 38738727-38742957 processed_transcript
  ENSMUST00000132636 Nr6a1-004 38740424-38785111 processed_transcript
  ENSMUST00000142113 Nr6a1-003 38739135-38784520 protein_coding
  ENSMUST00000142130 Nr6a1-002 38740543-38926275 protein_coding
  ENSMUST00000156301 Nr6a1-006 38742441-38784469 processed_transcript
  ENSMUST00000168098 Nr6a1-202 38723374-38784515 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000076275ENSMUST00000112877ENSMUST00000156301
Transcript ID C166 Tie2+ EC mES
ENSMUST00000076275 0.435±0.11 0.215±0.00 N/A
ENSMUST00000112877 0.461±0.13 0.124±0.06 8.127±1.65
ENSMUST00000156301 N/A 0.356±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008N3 CIL_0008N3_0002 VISTA
CIL_00098L CIL_00098L_0002 VISTA
CIL_00075I CIL_00075I_0002 CGP
CIL_00075J CIL_00075J_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IMP RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IDA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005667 IDA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0007276 IEP gamete generation
GO:0007283 IEA spermatogenesis
GO:0008270 IEA zinc ion binding
GO:0030154 IEA cell differentiation
GO:0042803 IDA protein homodimerization activity
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IDA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000148200 NR6A1 nuclear receptor subfamily 6, group A, member 1 protein_coding Homo_sapiens

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