ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: USP6 N-terminal like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148429 USP6NL 9606 - 10:11453946-11611754 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000277575 USP6NL-201 11460510-11532275 protein_coding
  ENST00000379237 USP6NL-005 11460510-11573737 protein_coding
  ENST00000443016 USP6NL-003 11563187-11573496 processed_transcript
  ENST00000606752 USP6NL-002 11564127-11611666 processed_transcript
  ENST00000609104 USP6NL-001 11453946-11611754 protein_coding
  ENST00000609853 USP6NL-004 11564127-11573841 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000277575ENST00000379237ENST00000443016ENST00000606752ENST00000609104
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000277575 1.164±0.46 3.702±1.41 1.901±0.00 5.738±0.00 5.682±2.37
ENST00000379237 N/A 1.027±0.18 N/A N/A 2.082±1.58
ENST00000443016 1.008±0.00 N/A N/A N/A 2.722±0.00
ENST00000606752 N/A 1.573±0.52 N/A N/A 2.968±0.00
ENST00000609104 N/A 0.542±0.52 N/A N/A 0.784±0.51

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008EV CIL_0008EV_0001 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 IDA:IEA Rab GTPase activator activity
GO:0005794 IEA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0007030 IMP Golgi organization
GO:0017137 IPI Rab GTPase binding
GO:0019068 IMP virion assembly
GO:0031410 IDA cytoplasmic vesicle
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0033126 IDA positive regulation of GTP catabolic process
GO:0035526 IMP retrograde transport, plasma membrane to Golgi
GO:0048227 IMP plasma membrane to endosome transport
GO:1903358 IMP regulation of Golgi organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022187 usp6nl protein_coding Danio_rerio
ENSMUSG00000039046 Usp6nl protein_coding Mus_musculus

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