ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039046 Usp6nl 10090 + 2:6322667-6446390 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042503 Usp6nl-003 6352733-6443494 protein_coding
  ENSMUST00000114937 Usp6nl-001 6322667-6446390 protein_coding
  ENSMUST00000132391 Usp6nl-002 6322772-6421012 processed_transcript
  ENSMUST00000150515 Usp6nl-004 6420922-6424835 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000042503ENSMUST00000114937
Transcript ID C166 Tie2+ EC mES
ENSMUST00000042503 14.335±0.80 9.102±5.50 2.207±0.82
ENSMUST00000114937 4.312±0.31 6.431±4.65 2.236±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008EV CIL_0008EV_0002 VISTA
CIL_0000RW CIL_0000RW_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 ISS Rab GTPase activator activity
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0007030 ISS Golgi organization
GO:0017137 IEA Rab GTPase binding
GO:0019068 IEA virion assembly
GO:0031410 ISS cytoplasmic vesicle
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0033126 IEA positive regulation of GTP catabolic process
GO:0035526 ISS retrograde transport, plasma membrane to Golgi
GO:0048227 IEA plasma membrane to endosome transport
GO:1903358 IEA regulation of Golgi organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022187 usp6nl protein_coding Danio_rerio
ENSG00000148429 USP6NL USP6 N-terminal like protein_coding Homo_sapiens

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