ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: ubiquitin specific peptidase 16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000156256 USP16 9606 + 21:29024629-29054488 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000334352 USP16-003 29024651-29054488 protein_coding
  ENST00000399973 USP16-006 29024656-29034919 protein_coding
  ENST00000399975 USP16-001 29024629-29054488 protein_coding
  ENST00000399976 USP16-002 29024629-29054488 protein_coding
  ENST00000474835 USP16-004 29024651-29054488 retained_intron
  ENST00000485067 USP16-005 29052123-29054488 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000334352ENST00000399973ENST00000399975ENST00000399976ENST00000474835ENST00000485067
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000334352 N/A N/A N/A N/A 0.934±0.00
ENST00000399973 N/A N/A N/A N/A 32.480±5.42
ENST00000399975 1.814±1.26 2.273±0.88 3.219±0.00 3.875±0.00 4.377±2.22
ENST00000399976 0.342±0.00 3.169±1.32 3.937±0.00 10.075±0.00 3.981±1.89
ENST00000474835 N/A 1.186±0.00 N/A N/A 1.381±0.77
ENST00000485067 1.149±0.00 N/A 4.517±0.00 N/A 2.111±1.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003CH CIL_0003CH_0001 CGP
CIL_000313 CIL_000313_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003713 IDA transcription coactivator activity
GO:0004197 IMP cysteine-type endopeptidase activity
GO:0004221 IDA ubiquitin thiolesterase activity
GO:0004843 IDA ubiquitin-specific protease activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 TAS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006357 ISS regulation of transcription from RNA polymerase II promoter
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0007049 TAS cell cycle
GO:0007067 IDA mitotic nuclear division
GO:0008270 IEA:IDA zinc ion binding
GO:0016578 IDA histone deubiquitination
GO:0035522 ISS monoubiquitinated histone H2A deubiquitination
GO:0036459 IEA ubiquitinyl hydrolase activity
GO:0042393 IDA histone binding
GO:0043130 IDA ubiquitin binding
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0045901 IMP positive regulation of translational elongation
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0051289 IPI protein homotetramerization
GO:0070537 IMP histone H2A K63-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060633 usp16 protein_coding Danio_rerio
ENSMUSG00000025616 Usp16 protein_coding Mus_musculus

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