ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: cleavage and polyadenylation specific factor 4, 30kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000160917 CPSF4 9606 + 7:99438922-99457371 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000292476 CPSF4-003 99439073-99457371 protein_coding
  ENST00000412686 CPSF4-010 99439425-99450795 protein_coding
  ENST00000430038 CPSF4-005 99439113-99450795 nonsense_mediated_decay
  ENST00000436336 CPSF4-001 99438922-99457342 protein_coding
  ENST00000440514 CPSF4-011 99450325-99456578 protein_coding
  ENST00000441580 CPSF4-004 99439376-99456589 protein_coding
  ENST00000451876 CPSF4-002 99438946-99457371 protein_coding
  ENST00000452047 CPSF4-007 99444785-99456645 protein_coding
  ENST00000465132 CPSF4-009 99450766-99453264 retained_intron
  ENST00000469897 CPSF4-012 99453687-99456670 retained_intron
  ENST00000471455 CPSF4-008 99444810-99454023 processed_transcript
  ENST00000482251 CPSF4-013 99450464-99452609 retained_intron
  ENST00000484112 CPSF4-006 99439450-99451079 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0004TK CIL_0004TK_0001 CGP
CIL_0004TL CIL_0004TL_0001 CGP
CIL_0004TM CIL_0004TM_0001 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005654 TAS nucleoplasm
GO:0005847 IDA mRNA cleavage and polyadenylation specificity factor complex
GO:0006397 IEA mRNA processing
GO:0008270 IEA zinc ion binding
GO:0019048 TAS modulation by virus of host morphology or physiology
GO:0019054 TAS modulation by virus of host process
GO:0019058 TAS viral life cycle
GO:0044822 IDA poly(A) RNA binding
GO:0046778 TAS modification by virus of host mRNA processing
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020217 cpsf4 protein_coding Danio_rerio
ENSMUSG00000029625 Cpsf4 protein_coding Mus_musculus

Loading