ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: sodium channel modifier 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163156 SCNM1 9606 + 1:151156664-151170297 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000368902 SCNM1-004 151166079-151169138 protein_coding
  ENST00000368905 SCNM1-001 151166042-151170297 protein_coding
  ENST00000459799 SCNM1-005 151167868-151169133 processed_transcript
  ENST00000461862 SCNM1-002 151166022-151167979 processed_transcript
  ENST00000471039 SCNM1-003 151166066-151166950 processed_transcript
  ENST00000497147 SCNM1-006 151166669-151169111 processed_transcript
  ENST00000602841 SCNM1-007 151156664-151169133 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000368902ENST00000368905ENST00000602841
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000368902 N/A 17.622±5.97 N/A N/A 23.173±14.95
ENST00000368905 N/A N/A N/A N/A 0.914±0.68
ENST00000602841 79.910±13.63 17.240±4.68 31.111±0.00 14.851±0.00 17.837±9.24

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0000UG CIL_0000UG_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0019899 IPI enzyme binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003027 scnm1 protein_coding Danio_rerio
ENSMUSG00000092607 Scnm1 protein_coding Mus_musculus

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