ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: ubiquitin specific peptidase 49
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164663 USP49 9606 - 6:41789896-41895361 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000373006 USP49-001 41797645-41895361 protein_coding
  ENST00000373009 USP49-201 41789898-41871637 protein_coding
  ENST00000373010 USP49-002 41796498-41887329 protein_coding
  ENST00000394253 USP49-007 41789896-41894160 protein_coding
  ENST00000423567 USP49-005 41806939-41894455 protein_coding
  ENST00000448078 USP49-004 41796677-41805745 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHMVEC-DHUVECENST00000373009
Transcript ID HAoEC HMVEC-D HUVEC
ENST00000373009 1.583±0.67 2.311±0.00 1.624±0.99

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008XI CIL_0008XI_0001 VISTA
CIL_00093V CIL_00093V_0001 VISTA
CIL_000963 CIL_000963_0001 VISTA
CIL_0001ZL CIL_0001ZL_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000398 IMP mRNA splicing, via spliceosome
GO:0004197 IMP cysteine-type endopeptidase activity
GO:0004221 IDA ubiquitin thiolesterase activity
GO:0004843 IDA ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008234 IEA cysteine-type peptidase activity
GO:0008270 IEA zinc ion binding
GO:0016579 IDA protein deubiquitination
GO:0035616 IDA histone H2B conserved C-terminal lysine deubiquitination
GO:0036459 IEA ubiquitinyl hydrolase activity
GO:0042393 IDA histone binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000229 usp49 protein_coding Danio_rerio
ENSMUSG00000090115 Usp49 protein_coding Mus_musculus

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