ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000090115 Usp49 10090 + 17:47630690-47686738 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024779 Usp49-001 47630690-47686738 protein_coding
  ENSMUST00000131550 Usp49-004 47673301-47680728 nonsense_mediated_decay
  ENSMUST00000145314 Usp49-003 47649621-47672184 protein_coding
  ENSMUST00000152724 Usp49-002 47672720-47681056 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000024779
Transcript ID C166 Tie2+ EC mES
ENSMUST00000024779 6.162±0.87 2.577±0.85 2.208±0.13

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000963 CIL_000963_0002 VISTA
CIL_0006L6 CIL_0006L6_0002 CGP
CIL_00093V CIL_00093V_0002 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000398 ISS mRNA splicing, via spliceosome
GO:0004197 ISS cysteine-type endopeptidase activity
GO:0004221 ISS ubiquitin thiolesterase activity
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008270 IEA zinc ion binding
GO:0016579 IEA protein deubiquitination
GO:0035616 ISS histone H2B conserved C-terminal lysine deubiquitination
GO:0036459 IEA ubiquitinyl hydrolase activity
GO:0042393 ISS histone binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000229 usp49 protein_coding Danio_rerio
ENSG00000164663 USP49 ubiquitin specific peptidase 49 protein_coding Homo_sapiens

Loading