ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: cleavage and polyadenylation specific factor 2, 100kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165934 CPSF2 9606 + 14:92121937-92172145 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000298875 CPSF2-001 92121937-92172145 protein_coding
  ENST00000553427 CPSF2-004 92121972-92134103 protein_coding
  ENST00000554290 CPSF2-005 92121985-92135432 nonsense_mediated_decay
  ENST00000555244 CPSF2-007 92155179-92161246 protein_coding
  ENST00000556622 CPSF2-006 92154021-92155153 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000298875ENST00000553427ENST00000554290ENST00000555244
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000298875 1.300±0.00 2.955±0.85 0.783±0.00 6.004±0.00 3.752±2.04
ENST00000553427 N/A N/A N/A N/A 2.145±0.00
ENST00000554290 N/A N/A N/A N/A 42.512±7.14
ENST00000555244 N/A 15.737±3.66 N/A 15.595±0.00 20.123±5.15

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0002LF CIL_0002LF_0002 CGP
CIL_0002N4 CIL_0002N4_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000398 TAS mRNA splicing, via spliceosome
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0005847 IEA:IDA mRNA cleavage and polyadenylation specificity factor complex
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006369 TAS termination of RNA polymerase II transcription
GO:0006378 IEA mRNA polyadenylation
GO:0006379 IEA mRNA cleavage
GO:0006398 IDA histone mRNA 3'-end processing
GO:0006406 TAS mRNA export from nucleus
GO:0008380 TAS RNA splicing
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0031124 TAS mRNA 3'-end processing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028971 cpsf2 protein_coding Danio_rerio
ENSMUSG00000041781 Cpsf2 protein_coding Mus_musculus

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