ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: tenascin XB
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168477 TNXB 9606 - 6:32041154-32115334 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000375244 TNXB-001 32041154-32109374 protein_coding
  ENST00000375247 TNXB-201 32065081-32098198 protein_coding
  ENST00000442721 TNXB-003 32098176-32115334 protein_coding
  ENST00000451343 TNXB-006 32041155-32046128 protein_coding
  ENST00000479795 TNXB-007 32093214-32109313 protein_coding
  ENST00000486148 TNXB-002 32095579-32109221 retained_intron
  ENST00000490077 TNXB-005 32041155-32046607 retained_intron
  ENST00000498094 TNXB-004 32042266-32043452 retained_intron
  ENST00000611016 TNXB-202 32041155-32062484 protein_coding
  ENST00000613214 TNXB-203 32065081-32098198 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000424 CIL_000424_0001 CGP

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005178 ISS integrin binding
GO:0005515 IEA protein binding
GO:0005518 IEA collagen binding
GO:0005576 IEA extracellular region
GO:0005578 NAS proteinaceous extracellular matrix
GO:0005583 IDA fibrillar collagen trimer
GO:0005615 IDA extracellular space
GO:0005622 IDA intracellular
GO:0006629 IEA lipid metabolic process
GO:0006631 IEA fatty acid metabolic process
GO:0006641 IEA triglyceride metabolic process
GO:0007155 ISS cell adhesion
GO:0007160 IEA cell-matrix adhesion
GO:0008201 ISS heparin binding
GO:0016337 IEA single organismal cell-cell adhesion
GO:0030036 ISS actin cytoskeleton organization
GO:0030198 IEA extracellular matrix organization
GO:0030199 IEA collagen fibril organization
GO:0031012 IDA extracellular matrix
GO:0032963 IMP collagen metabolic process
GO:0043206 IEA extracellular fibril organization
GO:0043506 IEA regulation of JUN kinase activity
GO:0048251 IMP elastic fiber assembly
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001760 tnxb protein_coding Danio_rerio
ENSMUSG00000033327 Tnxb protein_coding Mus_musculus

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