ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033327 Tnxb 10090 + 17:34670535-34719815 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000087399 Tnxb-001 34670535-34719815 protein_coding
  ENSMUST00000168533 Tnxb-002 34670535-34719627 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000087399ENSMUST00000168533
Transcript ID C166 Tie2+ EC mES
ENSMUST00000087399 0.320±0.21 0.002±0.00 0.042±0.00
ENSMUST00000168533 0.291±0.06 N/A 0.026±0.00

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005518 IDA collagen binding
GO:0005576 IDA extracellular region
GO:0005578 IDA proteinaceous extracellular matrix
GO:0005583 IEA fibrillar collagen trimer
GO:0005615 IDA extracellular space
GO:0005622 IEA intracellular
GO:0006629 IMP lipid metabolic process
GO:0006631 IMP fatty acid metabolic process
GO:0006641 IMP triglyceride metabolic process
GO:0007160 IMP cell-matrix adhesion
GO:0008201 IDA heparin binding
GO:0016337 IMP single organismal cell-cell adhesion
GO:0030198 IMP extracellular matrix organization
GO:0030199 IMP collagen fibril organization
GO:0031012 IEA extracellular matrix
GO:0032963 IEA collagen metabolic process
GO:0043206 IMP extracellular fibril organization
GO:0043506 IMP regulation of JUN kinase activity
GO:0048251 IEA elastic fiber assembly
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001760 tnxb protein_coding Danio_rerio
ENSG00000168477 TNXB tenascin XB protein_coding Homo_sapiens

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