ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: transmembrane emp24-like trafficking protein 10 (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170348 TMED10 9606 - 14:75131470-75176631 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000303575 TMED10-001 75131470-75176631 protein_coding
  ENST00000555036 TMED10-006 75134440-75147760 retained_intron
  ENST00000555085 TMED10-007 75147555-75176612 retained_intron
  ENST00000555873 TMED10-003 75134500-75176597 nonsense_mediated_decay
  ENST00000556969 TMED10-005 75133938-75147781 retained_intron
  ENST00000557670 TMED10-004 75134356-75147897 processed_transcript
  ENST00000622441 TMED10-008 75175921-75176532 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000303575ENST00000555085ENST00000556969ENST00000557670
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000303575 28.677±0.00 47.550±5.86 N/A 70.188±0.00 45.960±30.57
ENST00000555085 N/A 63.480±4.47 N/A N/A 80.694±37.91
ENST00000556969 20.627±0.00 N/A N/A N/A 37.857±32.89
ENST00000557670 33.573±0.00 70.209±7.71 18.474±0.00 N/A 49.036±25.08

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00084S CIL_00084S_0001 VISTA
CIL_00085H CIL_00085H_0001 VISTA
CIL_0007PT CIL_0007PT_0001 VISTA
CIL_0003G5 CIL_0003G5_0001 CGP
CIL_0004K7 CIL_0004K7_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0001822 IEA kidney development
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IDA Golgi apparatus
GO:0005801 ISS cis-Golgi network
GO:0005886 ISS plasma membrane
GO:0006810 IEA transport
GO:0006886 IDA intracellular protein transport
GO:0006888 TAS ER to Golgi vesicle-mediated transport
GO:0006890 ISS retrograde vesicle-mediated transport, Golgi to ER
GO:0007030 IEA Golgi organization
GO:0016021 ISS:IEA integral component of membrane
GO:0019905 IPI syntaxin binding
GO:0030137 ISS COPI-coated vesicle
GO:0030140 ISS trans-Golgi network transport vesicle
GO:0030667 ISS secretory granule membrane
GO:0032403 IEA protein complex binding
GO:0035459 TAS cargo loading into vesicle
GO:0035964 IDA COPI-coated vesicle budding
GO:0042589 ISS zymogen granule membrane
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043279 IEA response to alkaloid
GO:0045055 ISS regulated secretory pathway
GO:0048199 ISS vesicle targeting, to, from or within Golgi
GO:0048205 TAS COPI coating of Golgi vesicle
GO:0048208 TAS COPII vesicle coating
GO:0051259 IEA protein oligomerization
GO:0070062 IDA extracellular vesicular exosome
GO:0070765 IDA gamma-secretase complex
GO:1902003 IMP regulation of beta-amyloid formation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041391 tmed10 protein_coding Danio_rerio
ENSMUSG00000021248 Tmed10 protein_coding Mus_musculus

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