ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: polymerase (RNA) I polypeptide C, 30kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171453 POLR1C 9606 + 6:43509702-43529585 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304004 POLR1C-006 43517089-43529585 protein_coding
  ENST00000372344 POLR1C-005 43517088-43521506 protein_coding
  ENST00000372389 POLR1C-008 43517022-43521526 protein_coding
  ENST00000423780 POLR1C-007 43517112-43520312 protein_coding
  ENST00000428025 POLR1C-009 43509702-43520310 protein_coding
  ENST00000455605 POLR1C-010 43517133-43521494 retained_intron
  ENST00000481352 POLR1C-004 43517054-43521479 retained_intron
  ENST00000488601 POLR1C-001 43517098-43520703 retained_intron
  ENST00000512472 POLR1C-002 43517083-43519733 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000304004ENST00000372344ENST00000372389ENST00000423780ENST00000455605ENST00000481352ENST00000488601
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000304004 N/A N/A N/A 3.601±0.00 4.113±1.60
ENST00000372344 14.399±1.59 8.043±2.46 N/A N/A 4.541±1.92
ENST00000372389 26.801±0.00 17.565±7.19 15.247±0.00 9.710±0.00 11.198±6.10
ENST00000423780 N/A N/A N/A N/A 18.246±2.62
ENST00000455605 N/A N/A N/A N/A 1.727±1.40
ENST00000481352 N/A N/A 5.787±0.00 2.280±0.00 2.867±2.49
ENST00000488601 N/A N/A N/A N/A 5.454±3.93

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008YI CIL_0008YI_0001 VISTA
CIL_0005N0 CIL_0005N0_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001054 IBA RNA polymerase I activity
GO:0001056 IBA RNA polymerase III activity
GO:0003677 IEA DNA binding
GO:0003899 IEA:TAS DNA-directed RNA polymerase activity
GO:0005654 TAS nucleoplasm
GO:0005666 IBA DNA-directed RNA polymerase III complex
GO:0005736 TAS DNA-directed RNA polymerase I complex
GO:0005829 TAS cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006360 TAS transcription from RNA polymerase I promoter
GO:0006361 TAS transcription initiation from RNA polymerase I promoter
GO:0006362 TAS transcription elongation from RNA polymerase I promoter
GO:0006363 TAS termination of RNA polymerase I transcription
GO:0006383 TAS transcription from RNA polymerase III promoter
GO:0006385 TAS transcription elongation from RNA polymerase III promoter
GO:0006386 TAS termination of RNA polymerase III transcription
GO:0010467 TAS gene expression
GO:0032481 TAS positive regulation of type I interferon production
GO:0045087 TAS innate immune response
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039400 polr1c protein_coding Danio_rerio
ENSMUSG00000067148 Polr1c protein_coding Mus_musculus

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