ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000067148 Polr1c 10090 - 17:46243920-46248054 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000087026 Polr1c-001 46243920-46248054 protein_coding
  ENSMUST00000124126 Polr1c-002 46247299-46247968 retained_intron
  ENSMUST00000124655 Polr1c-005 46244101-46246573 protein_coding
  ENSMUST00000142706 Polr1c-004 46244613-46247968 protein_coding
  ENSMUST00000152583 Polr1c-003 46244524-46247932 retained_intron
  ENSMUST00000173232 Polr1c-007 46244933-46247968 nonsense_mediated_decay
  ENSMUST00000173349 Polr1c-008 46244835-46247968 protein_coding
  ENSMUST00000174392 Polr1c-006 46245262-46247967 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000087026ENSMUST00000124655ENSMUST00000173232
Transcript ID C166 Tie2+ EC mES
ENSMUST00000087026 27.617±3.01 19.307±10.52 44.734±11.41
ENSMUST00000124655 19.221±2.48 N/A N/A
ENSMUST00000173232 63.447±3.40 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008YI CIL_0008YI_0002 VISTA
CIL_0005N0 CIL_0005N0_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001054 IBA RNA polymerase I activity
GO:0001056 IBA RNA polymerase III activity
GO:0003677 IEA DNA binding
GO:0005654 TAS nucleoplasm
GO:0005666 IBA DNA-directed RNA polymerase III complex
GO:0005736 IBA DNA-directed RNA polymerase I complex
GO:0006360 IBA transcription from RNA polymerase I promoter
GO:0006383 IBA transcription from RNA polymerase III promoter
GO:0008150 ND biological_process
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039400 polr1c protein_coding Danio_rerio
ENSG00000171453 POLR1C polymerase (RNA) I polypeptide C, 30kDa protein_coding Homo_sapiens

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