ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: RAB6A, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175582 RAB6A 9606 - 11:73675638-73761137 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000310653 RAB6A-001 73675638-73761137 protein_coding
  ENST00000336083 RAB6A-002 73675896-73761091 protein_coding
  ENST00000400470 RAB6A-010 73704164-73760610 protein_coding
  ENST00000536566 RAB6A-201 73675638-73760093 protein_coding
  ENST00000537446 RAB6A-011 73679686-73760658 nonsense_mediated_decay
  ENST00000540771 RAB6A-014 73677944-73761119 protein_coding
  ENST00000541588 RAB6A-013 73677894-73761074 protein_coding
  ENST00000541795 RAB6A-005 73729464-73761017 retained_intron
  ENST00000541973 RAB6A-006 73677399-73760095 protein_coding
  ENST00000545625 RAB6A-012 73677908-73760638 nonsense_mediated_decay

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000310653ENST00000336083ENST00000536566ENST00000541973
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000310653 N/A 13.749±3.13 N/A N/A 8.747±6.99
ENST00000336083 N/A 6.823±3.73 N/A 21.650±0.00 16.087±14.67
ENST00000536566 3.939±2.66 12.910±4.71 2.542±0.00 29.089±0.00 18.176±15.49
ENST00000541973 N/A 12.428±3.15 N/A 29.249±0.00 26.247±15.10

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0003JC CIL_0003JC_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000042 IDA protein targeting to Golgi
GO:0003924 IDA:IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IDA:IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005802 IDA trans-Golgi network
GO:0005829 IDA cytosol
GO:0006184 IDA:IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006890 TAS retrograde vesicle-mediated transport, Golgi to ER
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IDA:IEA membrane
GO:0018125 IDA peptidyl-cysteine methylation
GO:0019882 IMP antigen processing and presentation
GO:0019904 IPI protein domain specific binding
GO:0031410 IDA cytoplasmic vesicle
GO:0031489 IPI myosin V binding
GO:0034067 IDA protein localization to Golgi apparatus
GO:0034498 IMP early endosome to Golgi transport
GO:0070062 IDA extracellular vesicular exosome
GO:0072385 TAS minus-end-directed organelle transport along microtubule

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000030704 Rab6a protein_coding Mus_musculus

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