ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: protocadherin beta 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177839 PCDHB9 9606 + 5:141187127-141191541 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000316105 PCDHB9-001 141187127-141191541 protein_coding
  ENST00000623266 PCDHB9-002 141187127-141188808 processed_transcript
  ENST00000624909 PCDHB9-003 141187207-141188747 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000316105ENST00000623266
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000316105 0.152±0.09 0.052±0.02 0.435±0.00 0.208±0.00 0.098±0.05
ENST00000623266 N/A 0.403±0.00 N/A N/A 1.085±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00062S CIL_00062S_000D CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007268 TAS synaptic transmission
GO:0007416 TAS synapse assembly
GO:0016020 IEA membrane
GO:0016021 NAS integral component of membrane
GO:0016339 NAS calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071891 pcdh2g6 protein_coding Danio_rerio
ENSDARG00000074738 pcdh2g9 protein_coding Danio_rerio
ENSDARG00000077343 CT573264.1 protein_coding Danio_rerio
ENSMUSG00000048347 Pcdhb18 protein_coding Mus_musculus

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