ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Transcript Info
Description: protocadherin beta 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000316105 PCDHB9-001 ENSG00000177839 9606 + 5:141187127-141191541 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000316105
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000316105 0.152±0.09 0.052±0.02 0.435±0.00 0.208±0.00 0.098±0.05

Conserved Regions

Not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007268 TAS synaptic transmission
GO:0007416 TAS synapse assembly
GO:0016020 IEA membrane
GO:0016021 NAS integral component of membrane
GO:0016339 NAS calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000055949 Pcdhb18-001 protein_coding Mus_musculus 0 1831
ENSMUST00000056522 Pcdhb2-001 protein_coding Mus_musculus 0 905
ENSMUST00000053073 Pcdhb11-001 protein_coding Mus_musculus 0 832
ENSMUST00000057228 Pcdhb9-001 protein_coding Mus_musculus 0 832
ENSMUST00000055495 Pcdhb12-001 protein_coding Mus_musculus 0 804
ENSMUST00000051126 Pcdhb10-001 protein_coding Mus_musculus 0 758
ENSMUST00000193137 Pcdhb2-002 protein_coding Mus_musculus 1.4013e-45 189

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