ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: AT rich interactive domain 3B (BRIGHT-like)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000179361 ARID3B 9606 + 15:74541177-74598131 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000346246 ARID3B-001 74541177-74598131 protein_coding
  ENST00000563567 ARID3B-006 74596596-74597977 processed_transcript
  ENST00000566147 ARID3B-004 74544350-74591408 protein_coding
  ENST00000566468 ARID3B-005 74591187-74593201 retained_intron
  ENST00000569680 ARID3B-002 74541264-74575017 retained_intron
  ENST00000622429 ARID3B-201 74541206-74598129 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000346246ENST00000563567ENST00000569680ENST00000622429
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000346246 N/A 2.060±1.24 N/A 1.847±0.00 1.487±1.04
ENST00000563567 N/A N/A N/A N/A 2.197±0.00
ENST00000569680 N/A 0.129±0.00 N/A N/A 0.429±0.04
ENST00000622429 1.225±0.00 0.709±0.01 2.222±0.00 N/A 0.762±0.44

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007UD CIL_0007UD_0001 VISTA

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000980 IEA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001205 IEA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 NAS:IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA:IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008150 ND biological_process
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000004661 Arid3b protein_coding Mus_musculus

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