ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: SET domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000181555 SETD2 9606 - 3:47016429-47163967 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000330022 SETD2-003 47016436-47124250 nonsense_mediated_decay
  ENST00000409792 SETD2-001 47016689-47163967 protein_coding
  ENST00000412450 SETD2-006 47120483-47163576 protein_coding
  ENST00000431180 SETD2-004 47016429-47123787 nonsense_mediated_decay
  ENST00000445387 SETD2-002 47016689-47123535 nonsense_mediated_decay
  ENST00000479832 SETD2-009 47037665-47047027 retained_intron
  ENST00000484689 SETD2-007 47088184-47098451 retained_intron
  ENST00000492397 SETD2-008 47062160-47083946 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHHSECHMVEC-DHUVECENST00000330022ENST00000409792ENST00000412450ENST00000431180ENST00000445387
Transcript ID HAoEC HHSEC HMVEC-D HUVEC
ENST00000330022 N/A N/A N/A 3.511±0.00
ENST00000409792 3.268±1.08 N/A 7.236±0.00 3.727±1.79
ENST00000412450 5.550±0.72 N/A N/A 4.365±1.84
ENST00000431180 1.216±0.50 N/A N/A 2.269±0.15
ENST00000445387 0.937±0.07 1.072±0.00 N/A 1.212±0.69

Conserved Regions

Not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IEA angiogenesis
GO:0001570 IEA vasculogenesis
GO:0001763 IEA morphogenesis of a branching structure
GO:0001843 IEA neural tube closure
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0006298 IMP mismatch repair
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006368 IMP transcription elongation from RNA polymerase II promoter
GO:0010452 IEA histone H3-K36 methylation
GO:0010468 IEA regulation of gene expression
GO:0010793 IMP regulation of mRNA export from nucleus
GO:0018023 IEA peptidyl-lysine trimethylation
GO:0018024 IDA:IEA histone-lysine N-methyltransferase activity
GO:0030900 IEA forebrain development
GO:0034728 IMP nucleosome organization
GO:0034968 IEA histone lysine methylation
GO:0035441 IEA cell migration involved in vasculogenesis
GO:0048332 IEA mesoderm morphogenesis
GO:0048568 IEA embryonic organ development
GO:0048701 IEA embryonic cranial skeleton morphogenesis
GO:0048864 IEA stem cell development
GO:0060039 IEA pericardium development
GO:0060669 IEA embryonic placenta morphogenesis
GO:0060977 IEA coronary vasculature morphogenesis
GO:0097198 IMP histone H3-K36 trimethylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062244 setd2 protein_coding Danio_rerio
ENSMUSG00000044791 Setd2 protein_coding Mus_musculus

Loading