ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000044791 Setd2 10090 + 9:110532597-110618633 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000153838 Setd2-001 110532597-110618633 protein_coding
  ENSMUST00000195911 Setd2-004 110561122-110567942 retained_intron
  ENSMUST00000196814 Setd2-008 110547970-110618614 nonsense_mediated_decay
  ENSMUST00000197260 Setd2-010 110617601-110618607 retained_intron
  ENSMUST00000197399 Setd2-009 110602174-110618148 nonsense_mediated_decay
  ENSMUST00000197655 Setd2-005 110573884-110594425 nonsense_mediated_decay
  ENSMUST00000198587 Setd2-003 110561204-110570735 retained_intron
  ENSMUST00000198697 Setd2-002 110594290-110605108 retained_intron
  ENSMUST00000198823 Setd2-006 110551296-110564612 protein_coding
  ENSMUST00000200460 Setd2-007 110573622-110618607 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000153838ENSMUST00000200460
Transcript ID C166 Tie2+ EC mES
ENSMUST00000153838 7.108±1.49 7.293±3.27 10.768±3.12
ENSMUST00000200460 N/A 6.520±1.58 6.479±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_000155 CIL_000155_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IMP angiogenesis
GO:0001570 IMP vasculogenesis
GO:0001763 IMP morphogenesis of a branching structure
GO:0001843 IMP neural tube closure
GO:0005634 IDA nucleus
GO:0005694 IEA chromosome
GO:0006298 ISS mismatch repair
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006368 ISS transcription elongation from RNA polymerase II promoter
GO:0010452 IMP histone H3-K36 methylation
GO:0010468 IMP regulation of gene expression
GO:0010793 IEA regulation of mRNA export from nucleus
GO:0018023 IMP peptidyl-lysine trimethylation
GO:0018024 ISS histone-lysine N-methyltransferase activity
GO:0030900 IMP forebrain development
GO:0034728 ISS nucleosome organization
GO:0035441 IMP cell migration involved in vasculogenesis
GO:0048332 IMP mesoderm morphogenesis
GO:0048568 IMP embryonic organ development
GO:0048701 IMP embryonic cranial skeleton morphogenesis
GO:0048864 IMP stem cell development
GO:0060039 IMP pericardium development
GO:0060669 IMP embryonic placenta morphogenesis
GO:0060977 IMP coronary vasculature morphogenesis
GO:0097198 ISS histone H3-K36 trimethylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062244 setd2 protein_coding Danio_rerio
ENSG00000181555 SETD2 SET domain containing 2 protein_coding Homo_sapiens

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