ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: SRY (sex determining region Y)-box 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182968 SOX1 9606 + 13:112067647-112070488 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000330949 SOX1-001 112067647-112070488 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECENST00000330949
Transcript ID HAoEC
ENST00000330949 0.024±0.01

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008SC CIL_0008SC_0001 VISTA
CIL_0007MI CIL_0007MI_0001 UCNEbase

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001046 IDA core promoter sequence-specific DNA binding
GO:0001764 IEA neuron migration
GO:0002089 IEA lens morphogenesis in camera-type eye
GO:0003677 NAS DNA binding
GO:0003700 NAS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 NAS nucleus
GO:0006325 NAS chromatin organization
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0021521 IEA ventral spinal cord interneuron specification
GO:0021879 IEA forebrain neuron differentiation
GO:0021884 IEA forebrain neuron development
GO:0030900 IEA forebrain development
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008131 sox1b protein_coding Danio_rerio
ENSDARG00000069866 sox1a protein_coding Danio_rerio
ENSMUSG00000096014 Sox1 protein_coding Mus_musculus

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