ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000096014 Sox1 10090 + 8:12395295-12400126 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000180353 Sox1-001 12395295-12400126 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; Tie2+ ECmESENSMUST00000180353
Transcript ID Tie2+ EC mES
ENSMUST00000180353 0.079±0.02 0.142±0.04

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008SC CIL_0008SC_0002 VISTA
CIL_0007MI CIL_0007MI_0002 UCNEbase

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001046 IEA core promoter sequence-specific DNA binding
GO:0001764 IMP neuron migration
GO:0002089 IMP lens morphogenesis in camera-type eye
GO:0003677 IDA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0021521 IMP ventral spinal cord interneuron specification
GO:0021879 IMP forebrain neuron differentiation
GO:0021884 IMP forebrain neuron development
GO:0030900 IMP forebrain development
GO:0043565 IDA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008131 sox1b protein_coding Danio_rerio
ENSDARG00000069866 sox1a protein_coding Danio_rerio
ENSG00000182968 SOX1 SRY (sex determining region Y)-box 1 protein_coding Homo_sapiens

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