ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: CCR4-NOT transcription complex, subunit 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000182973 CNOT10 9606 + 3:32685145-32773875 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000328834 CNOT10-001 32685145-32773875 protein_coding
  ENST00000331889 CNOT10-003 32685145-32773714 protein_coding
  ENST00000416457 CNOT10-004 32704818-32773714 nonsense_mediated_decay
  ENST00000430408 CNOT10-012 32734822-32769964 protein_coding
  ENST00000435630 CNOT10-002 32685220-32773616 nonsense_mediated_decay
  ENST00000454516 CNOT10-201 32695541-32773871 protein_coding
  ENST00000455381 CNOT10-010 32708697-32727874 nonsense_mediated_decay
  ENST00000463006 CNOT10-007 32695541-32708817 processed_transcript
  ENST00000463697 CNOT10-011 32715996-32727808 processed_transcript
  ENST00000466103 CNOT10-009 32703863-32708775 processed_transcript
  ENST00000468599 CNOT10-015 32764248-32765304 retained_intron
  ENST00000471003 CNOT10-013 32753261-32769960 processed_transcript
  ENST00000473064 CNOT10-017 32769023-32769964 processed_transcript
  ENST00000476967 CNOT10-018 32769665-32773512 retained_intron
  ENST00000479397 CNOT10-014 32764221-32769962 retained_intron
  ENST00000481526 CNOT10-016 32764132-32769964 retained_intron
  ENST00000485136 CNOT10-008 32703791-32713349 retained_intron
  ENST00000494439 CNOT10-006 32685319-32716311 processed_transcript
  ENST00000556853 CNOT10-019 32685319-32716311 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000328834ENST00000331889ENST00000416457ENST00000430408ENST00000435630ENST00000471003
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000328834 N/A 4.640±1.96 N/A 2.871±0.00 3.793±1.85
ENST00000331889 1.065±0.00 1.691±0.45 N/A N/A 1.406±0.64
ENST00000416457 1.519±0.00 2.819±0.49 N/A 3.643±0.00 2.134±1.10
ENST00000430408 6.988±0.37 N/A N/A N/A N/A
ENST00000435630 N/A N/A 1.537±0.00 1.840±0.00 1.745±0.82
ENST00000471003 N/A N/A N/A N/A 7.309±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00020K CIL_00020K_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000288 TAS nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000289 TAS nuclear-transcribed mRNA poly(A) tail shortening
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006417 IEA regulation of translation
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0030014 IDA CCR4-NOT complex
GO:0031047 IEA gene silencing by RNA

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058528 cnot10 protein_coding Danio_rerio
ENSMUSG00000056167 Cnot10 protein_coding Mus_musculus

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