ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: collagen and calcium binding EGF domains 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183287 CCBE1 9606 - 18:59430940-59697380 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000398179 CCBE1-201 59430940-59480240 protein_coding
  ENST00000439986 CCBE1-001 59430940-59697380 protein_coding
  ENST00000589116 CCBE1-002 59435146-59455212 retained_intron
  ENST00000589419 CCBE1-004 59448046-59666162 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHMVEC-DHUVECENST00000398179ENST00000439986ENST00000589116ENST00000589419
Transcript ID BECs HAoEC HHSEC HMVEC-D HUVEC
ENST00000398179 N/A 0.021±0.00 0.350±0.00 N/A 0.045±0.08
ENST00000439986 2.806±0.86 1.436±0.39 N/A 1.652±0.00 0.280±0.22
ENST00000589116 8.015±3.00 2.680±1.15 N/A N/A 0.265±0.36
ENST00000589419 N/A 5.802±2.59 N/A N/A 0.585±0.58

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0001P5 CIL_0001P5_0001 CGP
CIL_0007FI CIL_0007FI_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001946 ISS lymphangiogenesis
GO:0002020 IPI protease binding
GO:0002040 ISS sprouting angiogenesis
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005518 IDA collagen binding
GO:0005581 IEA collagen trimer
GO:0005615 IDA extracellular space
GO:0010575 IDA positive regulation vascular endothelial growth factor production
GO:0010595 IEA positive regulation of endothelial cell migration
GO:0010954 IDA positive regulation of protein processing
GO:0031012 IDA extracellular matrix
GO:0045766 IEA positive regulation of angiogenesis
GO:0048845 ISS venous blood vessel morphogenesis
GO:1900748 IDA positive regulation of vascular endothelial growth factor signaling pathway
GO:1901492 IEA positive regulation of lymphangiogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000046318 Ccbe1 protein_coding Mus_musculus

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