ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000046318 Ccbe1 10090 - 18:66045302-66302739 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000061103 Ccbe1-005 66056855-66291788 nonsense_mediated_decay
  ENSMUST00000130300 Ccbe1-001 66060967-66291838 protein_coding
  ENSMUST00000146610 Ccbe1-003 66045302-66291446 processed_transcript
  ENSMUST00000151343 Ccbe1-002 66269028-66302739 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000061103ENSMUST00000130300ENSMUST00000151343
Transcript ID C166 Tie2+ EC mES
ENSMUST00000061103 0.744±0.33 0.030±0.02 0.084±0.02
ENSMUST00000130300 N/A 0.131±0.07 N/A
ENSMUST00000151343 N/A 0.102±0.04 0.081±0.04

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0001P5 CIL_0001P5_0002 CGP
CIL_0007FI CIL_0007FI_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001946 ISS lymphangiogenesis
GO:0002020 IEA protease binding
GO:0002040 ISS sprouting angiogenesis
GO:0005509 IEA calcium ion binding
GO:0005518 ISO collagen binding
GO:0005581 IEA collagen trimer
GO:0005615 IEA extracellular space
GO:0010575 IEA positive regulation vascular endothelial growth factor production
GO:0010595 IMP positive regulation of endothelial cell migration
GO:0010954 IEA positive regulation of protein processing
GO:0031012 ISO extracellular matrix
GO:0045766 IDA positive regulation of angiogenesis
GO:0048845 ISS venous blood vessel morphogenesis
GO:1900748 IEA positive regulation of vascular endothelial growth factor signaling pathway
GO:1901492 IDA positive regulation of lymphangiogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000183287 CCBE1 collagen and calcium binding EGF domains 1 protein_coding Homo_sapiens

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