ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: SET domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000183576 SETD3 9606 - 14:99397746-99480879 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000329331 SETD3-003 99409804-99480788 protein_coding
  ENST00000331768 SETD3-001 99397746-99480879 protein_coding
  ENST00000357563 SETD3-004 99411578-99480837 nonsense_mediated_decay
  ENST00000436070 SETD3-002 99411279-99480790 protein_coding
  ENST00000446066 SETD3-005 99398469-99480801 nonsense_mediated_decay
  ENST00000453764 SETD3-008 99405315-99480860 nonsense_mediated_decay
  ENST00000453938 SETD3-007 99458299-99478769 processed_transcript
  ENST00000489770 SETD3-006 99398732-99413250 retained_intron

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHMVEC-DHUVECENST00000329331ENST00000331768ENST00000436070ENST00000453764ENST00000453938
Transcript ID BECs HAoEC HMVEC-D HUVEC
ENST00000329331 2.515±0.00 N/A N/A 1.263±1.03
ENST00000331768 2.525±0.00 18.198±5.51 12.531±0.00 13.239±7.12
ENST00000436070 N/A N/A N/A 1.103±0.18
ENST00000453764 N/A N/A N/A 5.065±2.52
ENST00000453938 N/A N/A N/A 0.932±0.00

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0007KT CIL_0007KT_0001 UCNEbase
CIL_0005H1 CIL_0005H1_0001 CGP
CIL_0009CK CIL_0009CK_0001 VISTA
CIL_0003HD CIL_0003HD_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000790 IEA nuclear chromatin
GO:0001102 IEA RNA polymerase II activating transcription factor binding
GO:0003713 ISS transcription coactivator activity
GO:0005515 IEA protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0010452 ISS histone H3-K36 methylation
GO:0018022 IEA peptidyl-lysine methylation
GO:0018023 ISS peptidyl-lysine trimethylation
GO:0018026 ISS peptidyl-lysine monomethylation
GO:0018027 ISS peptidyl-lysine dimethylation
GO:0042800 IEA histone methyltransferase activity (H3-K4 specific)
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046975 ISS histone methyltransferase activity (H3-K36 specific)
GO:0051149 IEA positive regulation of muscle cell differentiation
GO:0051568 IEA histone H3-K4 methylation
GO:2001141 IEA regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016513 setd3 protein_coding Danio_rerio
ENSMUSG00000056770 Setd3 protein_coding Mus_musculus

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