ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: SECIS binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187742 SECISBP2 9606 + 9:89318506-89359662 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000339901 SECISBP2-004 89318519-89359642 protein_coding
  ENST00000375807 SECISBP2-001 89318506-89359650 protein_coding
  ENST00000425851 SECISBP2-002 89325960-89341479 protein_coding
  ENST00000440898 SECISBP2-003 89332588-89338510 protein_coding
  ENST00000470305 SECISBP2-005 89322200-89330445 processed_transcript
  ENST00000477484 SECISBP2-006 89332917-89339947 processed_transcript
  ENST00000496597 SECISBP2-007 89356526-89358153 processed_transcript
  ENST00000498819 SECISBP2-008 89348148-89358129 processed_transcript
  ENST00000534113 SECISBP2-201 89318851-89359662 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; HAoECHMVEC-DHUVECENST00000339901ENST00000375807ENST00000470305
Transcript ID HAoEC HMVEC-D HUVEC
ENST00000339901 1.498±0.47 N/A 2.257±1.31
ENST00000375807 3.430±1.40 12.248±0.00 5.809±3.81
ENST00000470305 1.774±0.23 N/A 1.706±0.48

Conserved Regions

Region IDSub-RegionRegion Type
CIL_00069H CIL_00069H_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001514 IEA selenocysteine incorporation
GO:0003730 IDA mRNA 3'-UTR binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005739 IEA mitochondrion
GO:0006412 IEA translation
GO:0030529 IEA ribonucleoprotein complex
GO:0035368 IEA selenocysteine insertion sequence binding
GO:0043021 IEA ribonucleoprotein complex binding
GO:0044822 IDA poly(A) RNA binding
GO:2000623 IEA negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000073892 secisbp2 protein_coding Danio_rerio
ENSMUSG00000035139 Secisbp2 protein_coding Mus_musculus

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