ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035139 Secisbp2 10090 + 13:51651697-51684044 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040117 Secisbp2-001 51651697-51684044 protein_coding
  ENSMUST00000110044 Secisbp2-002 51651741-51666256 protein_coding
  ENSMUST00000127360 Secisbp2-004 51651797-51657029 processed_transcript
  ENSMUST00000146011 Secisbp2-006 51679733-51682529 retained_intron
  ENSMUST00000153877 Secisbp2-005 51681773-51683489 retained_intron
  ENSMUST00000154202 Secisbp2-003 51651797-51665345 processed_transcript

Expression Patterns


Heat Map
Numeric Values
Transcript'; C166Tie2+ ECmESENSMUST00000040117
Transcript ID C166 Tie2+ EC mES
ENSMUST00000040117 4.477±0.53 4.116±2.61 1.304±0.52

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0008UF CIL_0008UF_0002 VISTA
CIL_00069H CIL_00069H_0002 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001514 IMP selenocysteine incorporation
GO:0003730 IEA mRNA 3'-UTR binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0030529 IDA ribonucleoprotein complex
GO:0035368 IDA selenocysteine insertion sequence binding
GO:0043021 IDA ribonucleoprotein complex binding
GO:0044822 IEA poly(A) RNA binding
GO:2000623 IMP negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000073892 secisbp2 protein_coding Danio_rerio
ENSG00000187742 SECISBP2 SECIS binding protein 2 protein_coding Homo_sapiens

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