ANGIOGENES: A knowledge database for angiogenesis

Institute of Cardiovascular Regeneration, Goethe University Frankfurt

Gene Info

Description: protein tyrosine phosphatase, receptor type, T
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196090 PTPRT 9606 - 20:42072752-43189970 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356100 PTPRT-004 42072752-43189733 protein_coding
  ENST00000373184 PTPRT-006 42072752-43189733 protein_coding
  ENST00000373187 PTPRT-002 42072752-43189733 protein_coding
  ENST00000373190 PTPRT-001 42072752-43189842 protein_coding
  ENST00000373193 PTPRT-009 42072774-43189917 protein_coding
  ENST00000373198 PTPRT-005 42072752-43189969 protein_coding
  ENST00000373201 PTPRT-007 42072752-43189970 protein_coding
  ENST00000485499 PTPRT-008 42885842-42966419 processed_transcript
  ENST00000612229 PTPRT-201 42072774-42472569 protein_coding
  ENST00000617474 PTPRT-010 42080879-43189917 nonsense_mediated_decay
  ENST00000618610 PTPRT-202 42080879-42472562 protein_coding
  ENST00000620410 PTPRT-203 42677866-42791467 protein_coding

Expression Patterns


Heat Map
Numeric Values
Transcript'; BECsHAoECHHSECHUVECENST00000373187ENST00000612229ENST00000618610ENST00000620410
Transcript ID BECs HAoEC HHSEC HUVEC
ENST00000373187 N/A N/A 0.166±0.00 N/A
ENST00000612229 N/A 0.004±0.00 0.564±0.00 0.002±0.00
ENST00000618610 0.012±0.00 0.018±0.00 N/A 0.019±0.01
ENST00000620410 N/A 0.042±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion Type
CIL_0004E5 CIL_0004E5_0001 CGP
CIL_0004E4 CIL_0004E4_0001 CGP

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IEA protein binding
GO:0005886 IDA plasma membrane
GO:0006470 IEA protein dephosphorylation
GO:0007155 NAS cell adhesion
GO:0007156 IDA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007165 NAS signal transduction
GO:0007169 IMP transmembrane receptor protein tyrosine kinase signaling pathway
GO:0008013 IPI beta-catenin binding
GO:0009986 IDA cell surface
GO:0016020 IEA membrane
GO:0016021 NAS integral component of membrane
GO:0016311 IEA dephosphorylation
GO:0016790 IEA thiolester hydrolase activity
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0045294 IDA alpha-catenin binding
GO:0045295 IDA gamma-catenin binding
GO:0045296 IPI cadherin binding
GO:0051393 IEA alpha-actinin binding
GO:0070097 IPI delta-catenin binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000053141 Ptprt protein_coding Mus_musculus

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